PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098957.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family B3
Protein Properties Length: 361aa    MW: 40579.9 Da    PI: 6.4424
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67.2e-16181282199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l++sdv++++r+vlpk+ ae h   ++ +e++ +++ d +g  +W +k++y  +++s++yvl+  + +Fv  +gL  +D ++ +  ++ ++
  XP_011098957.1 181 FKKQLKNSDVSALRRMVLPKRDAEIHlpVLEAKEGISISMLDMDGiHEWWFKFRYwpNNSSRMYVLE-STGDFVYTHGLVPNDYILVY--QNvED 272
                     89*********************999**666668899********9*******99888999999999.9***************9999..67799 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +++v+ +++k
  XP_011098957.1 273 GRYVIEARKK 282
                     9999999886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.2E-21177282IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.94E-17180277IPR015300DNA-binding pseudobarrel domain
CDDcd100177.81E-21180281No hitNo description
PROSITE profilePS508638.628181283IPR003340B3 DNA binding domain
SMARTSM010192.2E-14181283IPR003340B3 DNA binding domain
PfamPF023623.3E-12181282IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MNHHCTNVIS DHSILAKFRT IISLTHYYPS LLLIIRTPHS LPLTHTISLS LSLSLPPPPP  60
PPLLFFVLLP NLKMDYSYGN GNGKVLMGGG SSSSSSGGTA SAAVRGDSRR RSSSSSRQRN  120
QQRHSSSRAD LFSGPGFNVQ RGPRMRRSRR ASLDSLAFPG LHVPPLPAPR EIDLSKLSYL  180
FKKQLKNSDV SALRRMVLPK RDAEIHLPVL EAKEGISISM LDMDGIHEWW FKFRYWPNNS  240
SRMYVLESTG DFVYTHGLVP NDYILVYQNV EDGRYVIEAR KKEDYDAPRI LDNLVINETT  300
TEELTLPEPP ALDGTEMLYE YDANFMDDSP LDYLGESINL PSLGSSTSFE PIDDYNAEDF  360
E
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0482422e-91KJ048242.1 Sesamum indicum clone TilSSR_19443 microsatellite Sesame_19443 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098957.10.0PREDICTED: B3 domain-containing transcription factor FUS3-like isoform X1
SwissprotQ9LW319e-51FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A022QSZ81e-104A0A022QSZ8_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80452125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-50B3 family protein